5 Commits

Author SHA1 Message Date
Luis Rodriguez 27d82b1567 Python: Ignore non-project workspace glob matches (#7509)
* Python: Ignore non-project workspace glob matches

* test: collect workspace script tests

* test: remove standalone script test

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Co-authored-by: Luis Rodriguez <25299418+luisangelrod@users.noreply.github.com>
Co-authored-by: Luis Rodriguez <luis.rodriguez@bcpos.com>
2026-08-11 19:14:18 +00:00
Eduard van Valkenburg 6e95517659 Python: Split type checkers by target (pyright source, 5 checkers on tests/samples) (#6443)
* Python: Split type checkers by target (pyright source, 5 checkers on tests/samples)

Rework the typing setup along the lines of the 'too many type checkers'
approach:

- Pyright (strict) is now the sole source-code type checker; mypy is
  removed from source and its [tool.mypy] block becomes a relaxed profile
  used only for tests/samples.
- Tests are checked by all five checkers (pyright relaxed, mypy, pyrefly,
  ty, zuban); samples by pyright, pyrefly, and ty. All run in a relaxed/
  basic profile so authors aren't forced into over-annotation.
- Add pyrightconfig.tests.json and bump sample pyright configs to basic.
- Unify test/sample typing onto the same parallel fan-out used by source
  pyright via run_command_items in task_runner.py.
- Make version-conditional imports symmetric: keep or drop the
  '# type: ignore' on both branches so results match across interpreter
  versions (local vs CI).
- Update SKILL.md, DEV_SETUP.md, and CODING_STANDARD.md for the five
  gating checkers and pyright on source+tests+samples.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* Python: Fix merge regressions from main (typing + runtime)

Merging main into the type-checker split branch surfaced regressions that
the new five-checker test suite and unit tests caught:

Runtime fixes:
- anthropic: restore the dropped `cache_read_input_token_count` mapping in
  _parse_usage_from_anthropic (lost during merge conflict resolution).
- gemini: _get_function_calling_mode test helper returned str(enum)
  ('FunctionCallingConfigMode.AUTO') instead of the enum value ('AUTO').
- openai: _response_id_from_token test helper was an infinite self-recursion;
  return token['response_id'].
- orchestrations: reset output_events per approval iteration so the terminal
  output assertion counts only the final run.
- core: drop a stale duplicate harness test whose message ('non-negative')
  contradicted the source ('positive').
- purview: import PolicyLocation/PolicyScope/ProtectionScopeActivities/
  ExecutionMode used by the processor tests.

Type-checker fixes (tests, relaxed profile):
- core: pyright/mypy/pyrefly/ty/zuban green-ups across the harness, MCP,
  observability and types tests.
- anthropic/openai: route provider-namespaced UsageDetails keys through a
  dict cast (extra_items TypedDict unsupported by mypy/ty).
- purview: typed model constructors and cache-mock casts.
- ag-ui: annotate WorkflowContext[Any, Any] so yield_output accepts test
  payloads, guard Optional forwarded_props, and ty-ignore intentional bad args.

Source pyright (sole source checker) flagged unnecessary ignores newly
introduced by merged code in core _tools.py and declarative _declarative_base.py.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* Python: Isolate per-package mypy cache in test-typing fan-out

The parallel test-typing fan-out runs many mypy processes concurrently,
all defaulting to a single shared ./.mypy_cache. Concurrent writes corrupt
the cache and mypy aborts with INTERNAL ERROR (intermittently, depending on
worker timing) -- which is why CI's Test Typing job failed on a shifting set
of packages while a single-package run was fine.

Give each mypy invocation an isolated cache dir keyed by its target paths so
incremental caching still works per package without races. Other checkers
(zuban/pyrefly/ty/pyright) maintain their own caches and are unaffected.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* Python: Make lab pyright-only on source (drop source mypy)

Lab was the last package still running mypy on its source code, requiring
mypy-only `# type: ignore` comments that pyright (the sole source checker
everywhere else) flags as unnecessary. Align lab with the rest of the
monorepo:

- Remove the lab source mypy poe tasks (mypy-gaia/lightning/tau2) and the
  now-dead strict [tool.mypy] config block.
- Drop the 'Run lab mypy' CI step; lab source is type-checked by pyright only.

Lab tests remain covered by the workspace test-typing fan-out (mypy, pyrefly,
ty, zuban, pyright over tests using the relaxed root config).

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* Python: Fix test-typing regressions from latest main merge

A fresh merge from main brought in new test code never run under the
five-checker test-typing suite. Green up across the affected packages:

- core: narrow Optional span.attributes with 'and' guards in span filters
  and assert+cast the json.loads(...attributes[...]) reads (test_observability);
  match the existing as_agent ignore on the protocol-typed fixture (test_clients).
- openai: align new streaming tests with the established chat_options dict
  pattern (ChatOptions TypedDict isn't assignable to dict), route Optional
  .annotations[0] access through a small _first_annotation helper (mirrors the
  file's assert-not-None convention), and annotate a mapped ResponseStream.
- foundry_hosting: annotate error: dict[str, Any] = body.get(...) or {}
  (zuban needs the annotation).
- foundry: narrow ignores for the live AIProjectClient credential arg (pyrefly)
  and connections.get_default (zuban) SDK type gaps.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* updated pyright version

* pyright fix

* Python: Fix source typing for pyright 1.1.410

Pyright 1.1.410 tightened several checks. Apply the same source fixes as
upstream PR #6275:

- anthropic: import AsyncAnthropicBedrock from anthropic.lib.bedrock and
  AsyncAnthropicVertex from anthropic.lib.vertex (no longer re-exported from
  the anthropic top-level package -> reportPrivateImportUsage).
- core _types.py: cast the transform-hook result to UpdateT (reportAssignmentType).
- core _workflows/_events.py: annotate the @contextmanager helper as
  Generator[None] instead of Iterator[None] (reportDeprecated).
- redis: build the combined filter expression with an explicit loop instead of
  reduce(and_, ...), which pyright could no longer fully type (drops the now
  unused functools.reduce / operator.and_ imports).

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* Python: Accept plain-text body in Azure Functions workflow/run endpoint

The workflow_orchestrator already accepts plain strings as well as JSON
objects via context.get_input(), but the start_workflow_orchestration HTTP
handler only accepted JSON and returned 400 for any non-JSON body. This made
the functions integration tests that POST text/plain to /api/workflow/run
(e.g. test_09_workflow_shared_state) fail consistently with 400 != 202.

Fall back to the raw request body (decoded as UTF-8) when the body is not
JSON, rejecting only a truly empty body. The JSON path is unchanged.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

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Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
2026-06-18 15:06:20 +00:00
Ben Thomas b000a2cf51 Python: Adding AgentFileStore and FileAccessProvider to support file access operations. (#6099)
* Adding AgentFileStore and FileAccessProvider to support file ased operations for agents.

* Address PR review feedback on FileAccessProvider

- Probe symlinks on the unresolved candidate path so in-root symlinks
  cannot silently pass and out-of-root symlinks surface the correct
  error message.
- Validate matching_lines elements in FileSearchResult.from_dict and
  raise a clean ValueError for non-mapping entries.
- Cap search regex pattern length (256 chars) via a new
  _compile_search_regex helper to mitigate ReDoS, and surface the cap
  in the file_access_search_files tool description.
- Skip non-UTF-8 files during filesystem search instead of aborting
  the entire directory walk.
- Replace the module-scope trailing string in the data-processing
  sample with comments to avoid Ruff B018.
- Remove the checked-in working/region_totals.md sample artifact so
  the save flow works from a clean checkout.
- Expand the Windows stdout reconfiguration comment in task_runner.py
  for clarity.
- Add tests for invalid/oversize regex, non-UTF-8 file search, and
  in-root symlink rejection.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* Fix mypy redundant-cast in FileSearchResult.from_dict

Use cast(list[object], ...) instead of cast(list[Any], ...) so the
cast represents a real type change (lists are invariant) and is no
longer flagged by mypy as redundant, while still satisfying pyright's
reportUnknownVariableType. Matches the existing pattern in _memory.py.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* Tighten path normalization and directory resolution in FileAccess

- _normalize_relative_path now strips surrounding whitespace up front
  so leading/trailing spaces never leak into file segments, and
  rejects trailing path separators for file paths so 'foo/' is no
  longer silently coerced to 'foo'.
- FileSystemAgentFileStore._resolve_safe_directory_path normalizes
  with is_directory=True and maps an empty normalized result to the
  root. This matches InMemoryAgentFileStore so whitespace-only
  directory inputs resolve to the root instead of raising.
- Added tests for whitespace stripping, trailing-separator rejection,
  and whitespace-only directory listing on the filesystem store.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* Harden FileAccess search and atomic save in store API

- Add wall-clock timeout (10s) around regex scans so a pathological pattern (e.g. `(a+)+`) below the length cap cannot stall the event loop.
- Offload the InMemoryAgentFileStore regex scan to a worker thread, matching the filesystem store.
- Fail closed when `Path.is_symlink` raises during the safe-path probe so a permission error cannot silently bypass the symlink/reparse-point rejection.
- Add `overwrite: bool = True` to `AgentFileStore.write_file`; the in-memory store performs the check under the existing lock and the filesystem store uses `open(mode='x')` so concurrent callers cannot race past `overwrite=False`.
- `file_access_save_file` now relies on the atomic store call instead of a separate `file_exists` round-trip.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* Fix Python 3.10 timeout handling and add directory arg to list/search tools

- Catch asyncio.TimeoutError in _run_search_with_timeout. In Python 3.10
  asyncio.wait_for raises asyncio.exceptions.TimeoutError, which is
  distinct from the builtin TimeoutError (the two were unified in 3.11).
  Catching the asyncio alias works on every supported version.
- Add an optional directory parameter to file_access_list_files and
  file_access_search_files so agents can enumerate / scope searches to
  nested folders, not just the store root.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* Address FileAccess review feedback: case, errors, signal, TOCTOU

- InMemoryAgentFileStore now stores (display_name, content) so list_files
  and search_files return the original-case names callers wrote, matching
  the behaviour of FileSystemAgentFileStore on case-preserving filesystems
  and removing the silent in-memory vs. on-disk contract divergence.
- FileSystemAgentFileStore.read_file raises ValueError instead of letting
  UnicodeDecodeError bubble for binary / non-UTF-8 input, restoring
  symmetry with search_files (which still skips) and giving the tool
  layer a recoverable type to translate.
- Tool wrappers now catch ValueError and OSError around every operation
  and surface them as readable strings, so 'you used ..' and 'the file
  already exists' are both reported to the model the same way instead of
  the former crashing out as an unhandled exception.
- _search_files_sync logs per skipped non-UTF-8 file at WARNING and an
  aggregate INFO summary so operators can distinguish 'no matches' from
  'half the corpus was unreadable'.
- FileSystemAgentFileStore softens its docstrings to acknowledge the
  inherent probe-then-open TOCTOU window. On POSIX both read and write
  now pass O_NOFOLLOW so the kernel refuses if the leaf segment becomes
  a symlink between the probe and the open. Windows has no equivalent
  flag; the limitation is documented.
- Tests cover: case preservation on list/search, ValueError on non-UTF-8
  read at the store and tool layer, tool-layer string responses for
  path-traversal and oversized-regex inputs, search-skip log output,
  symlink rejection on delete/search/list, and symlinked intermediate
  directory rejection.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* Address FileAccess nit comments: docstrings, enumerate, opt-in delete approval

- Expand FileSearchMatch/FileSearchResult.to_dict docstrings to explain why
  the override is needed (__slots__ defeats the mixin's __dict__ iteration)
  and why exclude/exclude_none are accepted-but-ignored (mixin signature
  compatibility for callers like to_json).
- Use enumerate(lines, start=1) in _search_file_content so the +1 below is
  no longer needed; rename loop variable to line_number for clarity.
- Add opt-in require_delete_approval: bool = False on FileAccessProvider.
  When True, file_access_delete_file is registered with approval_mode
  'always_require' so the host must approve every delete. Default False
  preserves current behaviour and matches the .NET reference, but
  deployments that want a safer-by-default posture can enable it.
- Add tests covering both delete approval modes.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* FileAccess: require delete approval by default

Flip the default for FileAccessProvider(require_delete_approval=...) from
False to True so destructive deletes are gated by host approval out of the
box. Callers that want the previous autonomous behaviour (which matches the
.NET reference) can pass require_delete_approval=False.

Tests updated accordingly.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* Fixing linkinspector by installing Chrome for puppeteer first.

---------

Co-authored-by: Ben Thomas <25218250+alliscode@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
2026-05-28 20:09:50 +00:00
Eduard van Valkenburg f48c4512d3 Python: Simplify Python Poe tasks and unify package selectors (#4722)
* updated automation tasks and commands, with alias for the time being

* Restore aggregate test exclusions

Preserve the legacy all-tests scope for test --all by excluding lab and devui from the default aggregate sweep, while still allowing explicit package selection. Also ignore hidden/generated test directories such as .mypy_cache during aggregate discovery.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* updated versions in pre-commit

---------

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
2026-03-18 18:39:11 +00:00
Eduard van Valkenburg 977c3adfb2 Python: replace pre-commit with prek, add PEP 723 script deps, clean up dev dependencies (#3748)
* python: replace pre-commit with prek, add PEP 723 script deps, clean up dev dependencies

- Replace pre-commit with prek (Rust-native, faster pre-commit alternative)
- Move supported hooks to repo: builtin for zero-clone speed
- Add new builtin hooks: trailing-whitespace, check-merge-conflict, detect-private-key, check-added-large-files
- Update all hook versions to latest (pre-commit-hooks v6, pyupgrade v3.21.2, bandit 1.9.3, uv-pre-commit 0.10.0)
- Add PEP 723 inline script metadata to 34 samples with external deps
- Remove autogen-agentchat/autogen-ext from dev deps (now declared per-sample)
- Remove unused dev deps: pytest-env, tomli-w
- Add agent-framework-core>=1.0.0b260130 lower bound to all 21 packages
- Update CI workflow to use j178/prek-action
- Update docs: DEV_SETUP.md, AGENTS.md, CODING_STANDARD.md, SAMPLE_GUIDELINES.md

* updated lock

* python: fix prek config paths for local execution and CI workflow

Remove global 'files: ^python/' filter and strip python/ prefix from all path patterns in .pre-commit-config.yaml so prek finds files when run from the python/ directory. Update CI workflow to use --cd python instead of --config path. Include trailing whitespace fixes and dev dependency cleanup.

* python: move helper scripts to scripts/ folder and exclude from checks

* python: exclude AGENTS.md from prek markdown code lint

* python: exclude AGENTS.md and azure_ai_search sample from markdown lint

* fix m365 sample

* python: ignore CPY rule for samples with PEP 723 headers

* fix in dev_setup

* python: replace aiofiles with regular open in samples

* python: suppress reportUnusedImport in markdown code block checker

* python: use samples pyright config for markdown code block checker

Write a temp pyrightconfig.json matching pyrightconfig.samples.json rules (typeCheckingMode=off, only reportMissingImports and reportAttributeAccessIssue). Filter output to only fail on these rules since syntax-level errors (top-level await, undefined vars) are expected in README documentation snippets.

* python: use markdown-code-lint with fixed globs instead of prek file list

The prek-markdown-code-lint task received all changed files including non-README markdown and files with pre-existing broken imports. Replace with the standard markdown-code-lint task which uses the correct glob patterns (README.md, packages/**/README.md, samples/**/*.md).

* python: exclude READMEs with pre-existing broken imports from markdown lint

* python: fix broken README code snippets instead of excluding them

- ag-ui: replace TextContent (removed) with content.type == 'text'
- durabletask: fix import path to durabletask.worker.TaskHubGrpcWorker
- orchestrations: use constructor params instead of .participants() method
- observability: mark deprecated code blocks as plain text, filter
  reportMissingImports to agent_framework modules only
- remove README excludes from markdown-code-lint task

* add revision to gaia download

* feat(python): parallelize checks across packages

Run (package × task) cross-product in parallel using ThreadPoolExecutor
and subprocesses. Key changes:

- Add scripts/task_runner.py with shared parallel execution engine
- Update run_tasks_in_packages_if_exists.py to accept multiple tasks
- Update run_tasks_in_changed_packages.py with --files flag and parallel support
- Add check-packages poe task (fmt+lint+pyright+mypy in parallel)
- Add prek-markdown-code-lint and prek-samples-check with change detection
- Split CI code quality workflow into parallel prek and mypy jobs
- Update DEV_SETUP.md to document new parallel behavior

Core package changes still trigger checks on all packages.

* feat(ci): split code quality into 4 parallel jobs

Split the single prek job into parallel jobs:
- pre-commit-hooks: lightweight hooks (SKIP=poe-check)
- package-checks: fmt/lint/pyright/mypy via check-packages
- samples-markdown: samples-lint, samples-syntax, markdown-code-lint
- mypy: change-detected mypy checks

All 4 jobs run concurrently (×2 Python versions = 8 runners).

* feat(ci): use only Python 3.10 for code quality checks

* refactor(python): add future annotations and remove quoted types

Add `from __future__ import annotations` to 93 package files that
used quoted string annotations, then run pyupgrade --py310-plus to
remove the now-unnecessary quotes.

Fixes https://github.com/microsoft/agent-framework/issues/3578
2026-02-09 17:51:01 +00:00