#include "mst.h" #include #include "../../classes/graph.h" #include "../../common/utils.h" UnionFind::UnionFind() {} UnionFind::UnionFind(std::vector elements) { for (node_t x : elements) { parents[x] = x; weights[x] = 1; } } node_t UnionFind::operator[](node_t object) { if (!parents.count(object)) { parents[object] = object; weights[object] = 1; return object; } std::vector path; path.push_back(object); node_t root = parents[object]; while (root != path.back()) { path.push_back(root); root = parents[root]; } for (node_t ancestor : path) { parents[ancestor] = root; } return root; } void UnionFind::_union(node_t object1, node_t object2) { node_t root, r; object1 = (*this)[object1]; object2 = (*this)[object2]; if (weights[object1] < weights[object2]) { root = object1, r = object2; } else { root = object2, r = object1; } weights[root] += weights[r]; parents[r] = root; } struct mst_Edge { double wt; node_t start_node, end_node; edge_attr_dict_factory edge_attr; mst_Edge(double wt, node_t start_node, node_t end_node, edge_attr_dict_factory edge_attr) { this->wt = wt; this->start_node = start_node; this->end_node = end_node; this->edge_attr = edge_attr; } }; py::object kruskal_mst_edges(py::object G, py::object minimum, py::object weight, py::object data, py::object ignore_nan) { UnionFind subtrees; Graph G_ = G.cast(); std::string weight_key = weight_to_string(weight); std::vector> edges; int sign = minimum.cast().equal(py::cast(true)) ? 1 : -1; for (graph_edge& edge : G_._get_edges()) { weight_t wt = (edge.attr.count(weight_key) ? edge.attr[weight_key] : 1) * sign; if (!ignore_nan.cast() && isnan(wt)) { PyErr_Format(PyExc_ValueError, "NaN found as an edge weight. Edge (%R, %R, %R)", G_.id_to_node[py::cast(edge.u)].ptr(), G_.id_to_node[py::cast(edge.v)].ptr(), attr_to_dict(edge.attr).ptr()); return py::none(); } edges.emplace_back(wt, edge); } std::sort(edges.begin(), edges.end(), [](const std::pair& edge1, const std::pair& edge2) -> bool { return edge1.first < edge2.first; }); py::list ret; for (const auto& edge : edges) { node_t u = edge.second.u, v = edge.second.v; if (subtrees[u] != subtrees[v]) { if (data.cast()) { ret.append(py::make_tuple(G_.id_to_node[py::cast(u)], G_.id_to_node[py::cast(v)], attr_to_dict(edge.second.attr))); } else { ret.append(py::make_tuple(G_.id_to_node[py::cast(u)], G_.id_to_node[py::cast(v)])); } subtrees._union(u, v); } } return ret; }; struct cmp { bool operator()(const mst_Edge& node1, const mst_Edge& node2) { return node1.wt > node2.wt; } }; py::object prim_mst_edges(py::object G, py::object minimum, py::object weight, py::object data, py::object ignore_nan) { Graph& G_ = G.cast(); py::list res = py::list(); node_dict_factory nodes_list = G_.node; std::unordered_set nodes; for (node_dict_factory::iterator iter = nodes_list.begin(); iter != nodes_list.end(); iter++) { node_t node_id = iter->first; nodes.emplace(node_id); } int sign = 1; if (!minimum.cast().equal(py::cast(true))) { sign = -1; } while (!nodes.empty()) { const node_t u = *(nodes.begin()); nodes.erase(nodes.begin()); std::priority_queue, cmp> frontier; std::unordered_map visited; node_t u_ = u; visited.emplace(u_, true); adj_attr_dict_factory u_neighbors = G_.adj[u]; for (adj_attr_dict_factory::iterator i = u_neighbors.begin(); i != u_neighbors.end(); i++) { node_t v = i->first; edge_attr_dict_factory d = i->second; double wt = sign; if (d.find(py::cast(weight)) != d.end()) { wt = d[py::cast(weight)] * sign; } if (isnan(wt)) { if (ignore_nan.cast()) { continue; } PyErr_Format(PyExc_ValueError, "NaN found as an edge weight. Edge {(%R %R %R)}", (G_.id_to_node.attr("get")(u)).ptr(), G_.id_to_node.attr("get")(v).ptr(), attr_to_dict(d).ptr()); return py::none(); } frontier.push(mst_Edge(wt, u_, v, d)); } while (!frontier.empty()) { mst_Edge node = frontier.top(); frontier.pop(); double W = node.wt; node_t u_id = node.start_node; node_t v_id = node.end_node; edge_attr_dict_factory d = node.edge_attr; if (visited.find(v_id) != visited.end() || nodes.find(v_id) == nodes.end()) { continue; } if (data.cast()) { res.append(py::make_tuple(G_.id_to_node.attr("get")(u_id), G_.id_to_node.attr("get")(v_id), attr_to_dict(d))); } else { res.append(py::make_tuple(G_.id_to_node.attr("get")(u_id), G_.id_to_node.attr("get")(v_id))); } visited.emplace(v_id, true); nodes.erase(v_id); adj_attr_dict_factory v_neighbors = G_.adj[v_id]; for (adj_attr_dict_factory::iterator j = v_neighbors.begin(); j != v_neighbors.end(); j++) { node_t w = j->first; edge_attr_dict_factory d2 = j->second; if (visited.find(w) != visited.end()) { continue; } double new_weight = sign; if (d2.find(py::cast(weight)) != d2.end()) { new_weight = d2[py::cast(weight)] * sign; } frontier.push(mst_Edge(new_weight, v_id, w, d2)); } } } return res; }