XU Pengfei 386bff0f84 fix(upgrade): refresh installer-written agent surfaces after a binary upgrade (#1238) (#1239) ...

* fix(upgrade): refresh installer-written agent surfaces after a binary upgrade

codegraph upgrade swapped the binary but never revisited what earlier
installs wrote into CLAUDE.md / AGENTS.md / GEMINI.md and the agent
configs, so sections written by a pre-1.0 installer kept teaching agents
a multi-tool surface (including tools that no longer exist) months of
releases later. The install path already self-heals everything it owns,
but nothing ever called it on upgrade.

- codegraph install --refresh: non-interactive sweep that re-runs
  install() for already-configured targets only — never a first
  install; permissions and prompt-hook choices are preserved.
- codegraph upgrade spawns it via the freshly-installed binary after a
  successful swap (the still-running old process would only rewrite its
  own stale template). Gated on PATH resolution and the
  CODEGRAPH_NO_INSTALL_REFRESH=1 kill-switch; never fatal to the
  upgrade.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* docs(installer): clarify refresh change reporting

---------

Co-authored-by: xuing <np2v9bvbbs@privaterelay.appleid.com>
Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
Co-authored-by: Colby McHenry <me@colbymchenry.com>

2026-07-10 10:58:55 -05:00

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